Building igl statically and moving to the dep scripts

Fixing dep build script on Windows and removing some warnings.

Use bundled igl by default.

Not building with the dependency scripts if not explicitly stated. This way, it will stay in
Fix the libigl patch to include C source files in header only mode.

src/libigl/igl/bfs_orient.h

@@ -0,0 +1,36 @@
+// This file is part of libigl, a simple c++ geometry processing library.
+// 
+// Copyright (C) 2013 Alec Jacobson <alecjacobson@gmail.com>
+// 
+// This Source Code Form is subject to the terms of the Mozilla Public License 
+// v. 2.0. If a copy of the MPL was not distributed with this file, You can 
+// obtain one at http://mozilla.org/MPL/2.0/.
+#ifndef IGL_BFS_ORIENT_H
+#define IGL_BFS_ORIENT_H
+#include <Eigen/Core>
+#include <igl/igl_inline.h>
+
+namespace igl
+{
+  // Consistently orient faces in orientable patches using BFS
+  //
+  // F = bfs_orient(F,V);
+  //
+  // Inputs:
+  //  F  #F by 3 list of faces
+  // Outputs:
+  //  FF  #F by 3 list of faces (OK if same as F)
+  //  C  #F list of component ids
+  //
+  //
+  template <typename DerivedF, typename DerivedFF, typename DerivedC>
+  IGL_INLINE void bfs_orient(
+    const Eigen::PlainObjectBase<DerivedF> & F,
+    Eigen::PlainObjectBase<DerivedFF> & FF,
+    Eigen::PlainObjectBase<DerivedC> & C);
+};
+#ifndef IGL_STATIC_LIBRARY
+#  include "bfs_orient.cpp"
+#endif
+
+#endif